A few manufacturers do make small changes to microphones throughout their production. It's quite likely that during the time between your first and second CS3, Sanken decided to give it a slightly flatter response.
As far as I'm aware, water itself wont damage the mic. It's the dirt and minerals in the water that can corrode the elements. If the mic does get wet, it's best to wash it with filtered water.
Is anyone aware of any major differences between the new KK capsules and output stages compared to the old ones? Apart from the option of AES out. https://www.neumann.com/?lang=en&id=current_microphones&cid=km_a_description